Basic Information
Locus ID:
nbis-gene-26953
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
UBA1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00031.1 | 115401 | 120735 | - | nbis-gene-26953 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 85,606.75 Da | 39.28 | 86.30 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 146 | 215 | 2.6E-21 | IPR032420 |
| Pfam | PF09358 | Ubiquitin fold domain | 676 | 765 | 2.4E-26 | IPR018965 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 425 | 605 | 7.1E-58 | IPR019572 |
| Pfam | PF00899 | ThiF family | 297 | 665 | 2.3E-57 | IPR000594 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 292 | 660 | 3.63E-90 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 125 | 281 | 5.36E-30 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 87 | 125 | 4.9E-8 | IPR035985 |
| Gene3D | G3DSA:1.10.10.2660 | - | 375 | 612 | 2.0E-65 | IPR042063 |
| Gene3D | G3DSA:3.10.290.60 | - | 678 | 768 | 2.8E-24 | IPR038252 |
| Gene3D | G3DSA:3.40.50.12550 | - | 103 | 310 | 1.4E-59 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 643 | 765 | 2.8E-54 | IPR018965 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 259 | 267 | - | IPR018074 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 88 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_039835368.1 | ubiquitin-activating enzyme E1 2 [Panicum virgatum] | 0 |
| P20973 | Ubiquitin-activating enzyme E1 1 OS=Triticum aestivum OX=4565 GN=UBA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0TXL5 | E1 ubiquitin-activating enzyme OS=Panicum virgatum OX=38727 GN=PVAP13_3NG042701 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology