Basic Information
Locus ID:
nbis-gene-26882
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00030.1 | 2529972 | 2535406 | - | nbis-gene-26882 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.72 | 45,127.96 Da | 49.37 | 69.02 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 178 | 252 | 1.5E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 136 | 277 | 1.75E-28 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 109 | 272 | 1.6E-33 | - |
| SMART | SM00220 | serkin_6 | 137 | 386 | 1.2E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 407 | 9.729152 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 214 | 226 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 65 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 9 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18190.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_039793530.1 | casein kinase 1-like protein HD16 isoform X2 [Panicum virgatum] | 0 |
| Q852L0 | Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W0B5 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_15108 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB02g011910.2N |
| Poaceae | Echinochloa crus-galli | 1 | CH02.3298 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-26882, nbis-gene-35699 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-8815 |