Basic Information
Locus ID:
nbis-gene-263
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 1134776 | 1145939 | + | nbis-gene-263 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 68,718.93 Da | 53.12 | 82.11 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 143 | 264 | 2.5E-27 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 132 | 260 | 1.29E-32 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 130 | 376 | 1.7E-36 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 135 | 340 | 9.8E-11 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 137 | 282 | 27.27025 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 64 | 96 | - | - |
| Coils | Coil | Coil | 274 | 301 | - | - |
| Coils | Coil | Coil | 333 | 364 | - | - |
| Coils | Coil | Coil | 514 | 548 | - | - |
| Coils | Coil | Coil | 469 | 489 | - | - |
| Coils | Coil | Coil | 382 | 416 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.1 | phragmoplast orienting kinesin 1. PHRAGMOPLAST ORIENTING KINESIN 1 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK1 constructs were more limited than those for POK2; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_022680288.1 | kinesin-like protein KIN-12E isoform X4 [Setaria italica] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9VPA9 | non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_10943 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology