halophFGD

Basic Information

Locus ID: nbis-gene-25738

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Protein of unknown function (DUF1668)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00028.1	2214721	2216175	-	nbis-gene-25738

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.57	53,300.64 Da	49.33	73.00	-0.28

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07893	Protein of unknown function (DUF1668)	82	395	2.9E-29	IPR012871
MobiDBLite	mobidb-lite	consensus disorder prediction	88	109	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_024315272.1	uncharacterized protein LOC112270903 [Brachypodium distachyon]	0
TrEMBL	A0A5J9VK84	DUF1618 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_18480 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	24	AH02.3348, AH03.1478, AH03.2495, AH04.205, AH06.2931 ... AH09.2277, BH03.1182, BH04.211, BH05.142, BH05.153, BH05.154, BH05.345, BH06.59, BH07.422, BH09.2465, CH04.216, CH05.202, CH05.401, CH05.402, CH05.405, CH06.3099, CH09.2605, CH09.2606, CH09.603
Poaceae	Eleusine coracana subsp. coracana	16	gene-QOZ80_3AG0208570, gene-QOZ80_3AG0208580 ... gene-QOZ80_3BG0253680, gene-QOZ80_3BG0253690, gene-QOZ80_5AG0379900, gene-QOZ80_5AG0379990, gene-QOZ80_5BG0426950, gene-QOZ80_5BG0427060, gene-QOZ80_5BG0427500, gene-QOZ80_5BG0427510, gene-QOZ80_6AG0540520, gene-QOZ80_6AG0540610, gene-QOZ80_6AG0540620, gene-QOZ80_6BG0493840, gene-QOZ80_6BG0493850, gene-QOZ80_6BG0494250
Poaceae	Lolium multiflorum	2	gene-QYE76_000182, gene-QYE76_000184
Poaceae	Oryza coarctata	6	Oco01G007980, Oco01G012320, Oco02G008270, Oco02G012460 ... Oco04G005760, Oco21G000830
Poaceae	Oryza sativa	11	LOC_Os01g05540.1, LOC_Os01g05560.1, LOC_Os02g10450.1 ... LOC_Os02g10460.1, LOC_Os04g13460.1, LOC_Os10g19230.1, LOC_Os11g04750.1, LOC_Os11g04760.1, LOC_Os12g04530.1, LOC_Os12g04540.1, LOC_Os12g28090.1
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0205117, Pt_Chr0206485, Pt_Chr0206765
Poaceae	Sporobolus alterniflorus	1	Chr19G011890
Poaceae	Thinopyrum elongatum	2	Tel3E01G668700, Tel5E01G820000
Poaceae	Triticum dicoccoides	6	gene_TRIDC3BG041200, gene_TRIDC3BG041270 ... gene_TRIDC3BG067490, gene_TRIDC4AG052080, gene_TRIDC6AG032870, gene_TRIDC6AG032880
Poaceae	Triticum aestivum	13	TraesCS1B02G314200.1, TraesCS1D02G303300.1.cds1 ... TraesCS3B02G274400.1.cds1, TraesCS3B02G457000.1.cds1, TraesCS3D02G416900.1.cds1, TraesCS6A02G212500.1, TraesCS6A02G212600.1, TraesCS6B02G242100.1, TraesCS6B02G242200.1, TraesCS6B02G242300.3.cds1, TraesCS6B02G242400.1, TraesCS6B02G242500.1, TraesCS6B02G431200.1.cds1
Poaceae	Zea mays	1	Zm00001eb399700_P001
Poaceae	Zoysia japonica	3	nbis-gene-25719, nbis-gene-25738, nbis-gene-25739
Poaceae	Zoysia macrostachya	2	Zma_g24675, Zma_g24688