Basic Information
Locus ID:
nbis-gene-25418
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00028.1 | 316283 | 316585 | - | nbis-gene-25418 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.70 | 7,038.97 Da | 9.43 | 60.94 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 9 | 64 | 9.68E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 64 | 2.0E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 36 | 64 | 8.697371 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 42 | 64 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025808492.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Panicum hallii] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7E642 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G056800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20034 |
| Apiaceae | Apium graveolens | 9 | Ag11G03867, Ag3G01646, Ag3G02214, Ag5G00356, Ag5G00757 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-25418 |