Basic Information
Locus ID:
nbis-gene-24943
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Hemerythrin HHE cation binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00027.1 | 980537 | 989797 | - | nbis-gene-24943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 99,172.71 Da | 48.01 | 84.28 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12108 | Hr-like | 41 | 167 | 1.04789E-26 | - |
| CDD | cd12108 | Hr-like | 297 | 425 | 3.8071E-16 | - |
| CDD | cd12108 | Hr-like | 642 | 799 | 6.64904E-25 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 640 | 800 | 1.1E-9 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 44 | 169 | 9.4E-12 | IPR012312 |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 294 | 427 | 7.8E-8 | IPR012312 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 36 | 186 | 7.7E-33 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 636 | 836 | 6.8E-24 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 296 | 443 | 2.2E-16 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_004961316.1 | zinc finger protein BRUTUS isoform X1 [Setaria italica] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SD10 | Zinc finger protein BRUTUS (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_58031 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology