Basic Information
Locus ID:
nbis-gene-24771
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00027.1 | 371259 | 374186 | + | nbis-gene-24771 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.03 | 41,938.64 Da | 35.69 | 82.78 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 72 | 348 | 2.7133E-110 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 69 | 348 | 5.7E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 348 | 4.1E-73 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 55 | 157 | 1.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 176 | 359 | 1.3E-62 | - |
| SMART | SM00220 | serkin_6 | 66 | 351 | 1.0E-55 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 17 | 357 | 2.3E-52 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 66 | 351 | 39.69323 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 215 | 227 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 319 | 341 | 7.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 171 | 184 | 7.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 275 | 297 | 7.6E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 209 | 227 | 7.6E-16 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01490.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002441568.1 | serine/threonine-protein kinase STY8 [Sorghum bicolor] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | C5YW43 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3009G242800 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology