Basic Information
Locus ID:
nbis-gene-24744
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00027.1 | 269444 | 272736 | - | nbis-gene-24744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.18 | 18,353.05 Da | 43.20 | 93.08 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 25 | 148 | 5.0E-17 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 18 | 154 | 8.7E-26 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2 | 134 | 1.4E-42 | - |
| SMART | SM00220 | serkin_6 | 25 | 156 | 1.8E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 25 | 156 | 16.570007 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 31 | 55 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42880.2 | - | 0 |
| RefSeq | XP_012700259.1 | mitogen-activated protein kinase 10 [Setaria italica] | 0 |
| Q5ZCI1 | Mitogen-activated protein kinase 10 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0Q3TU73 | mitogen-activated protein kinase OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_02.1391.V1.1, AsparagusV1_04.2346.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g010910.2N |
| Poaceae | Zea mays | 1 | Zm00001eb025520_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13596, nbis-gene-24744, nbis-gene-40726 |