Basic Information
Locus ID:
nbis-gene-24737
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00027.1 | 247658 | 252614 | + | nbis-gene-24737 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 62,801.17 Da | 36.17 | 82.97 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 245 | 378 | 1.34519E-23 | - |
| Pfam | PF17862 | AAA+ lid domain | 400 | 443 | 2.9E-12 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 247 | 377 | 2.3E-38 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 206 | 446 | 1.88E-60 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 379 | 464 | 4.2E-97 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 205 | 465 | 4.2E-97 | IPR027417 |
| SMART | SM00382 | AAA_5 | 243 | 380 | 3.3E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 350 | 369 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 493 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 482 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 180 | - | - |
| Coils | Coil | Coil | 430 | 462 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G52882.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_004961073.1 | putative cell division cycle ATPase [Setaria italica] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | K3Z3U6 | AAA domain-containing protein OS=Setaria italica OX=4555 GN=101785471 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology