Basic Information
Locus ID:
nbis-gene-24710
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
DYW family of nucleic acid deaminases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00027.1 | 160168 | 162513 | + | nbis-gene-24710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 50,584.49 Da | 76.26 | 63.44 | -0.75 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01535 | PPR repeat | 272 | 298 | 2.1E-7 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 343 | 365 | 0.74 | IPR002885 |
| SUPERFAMILY | SSF101447 | Formin homology 2 domain (FH2 domain) | 90 | 408 | 6.8E-5 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 179 | 332 | 1.3E-25 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 272 | 298 | 1.4E-5 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 269 | 299 | 9.909073 | IPR002885 |
| PRINTS | PR01217 | Proline rich extensin signature | 70 | 91 | 6.7E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 93 | 109 | 6.7E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 141 | 166 | 6.7E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 35 | 51 | 6.7E-11 | - |
| PRINTS | PR01217 | Proline rich extensin signature | 118 | 135 | 6.7E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 69 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 426 | 456 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 168 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 168 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G15690.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_021311222.1 | pentatricopeptide repeat-containing protein At2g15690 [Sorghum bicolor] | 0 |
| Q9ZQE5 | Pentatricopeptide repeat-containing protein At2g15690, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H66 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9SJ45 | DYW_deaminase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_52612 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology