Basic Information
Locus ID:
nbis-gene-245
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 1051337 | 1055426 | + | nbis-gene-245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 30,253.26 Da | 59.58 | 68.23 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 141 | 246 | 7.1E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 133 | 245 | 3.75E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 134 | 257 | 6.3E-20 | - |
| SMART | SM00220 | serkin_6 | 141 | 278 | 2.6E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 141 | 282 | 12.72556 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 147 | 173 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 67 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 87 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_004958484.1 | calcium/calmodulin-dependent serine/threonine-protein kinase 1 [Setaria italica] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VP63 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_10890 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology