Basic Information
Locus ID:
nbis-gene-24472
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00026.1 | 1066313 | 1069382 | - | nbis-gene-24472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 32,536.70 Da | 49.69 | 75.28 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 82 | 174 | 5.9E-9 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 85 | 175 | 1.69E-10 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 75 | 204 | 1.1E-23 | IPR011333 |
| SMART | SM00225 | BTB_4 | 73 | 176 | 0.0086 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 301 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G21010.1 | BTB-POZ and MATH domain 5. | 0 |
| RefSeq | XP_004963395.1 | BTB/POZ and MATH domain-containing protein 1 [Setaria italica] | 0 |
| Q1EBV6 | BTB/POZ and MATH domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=BPM5 PE=1 SV=1 | 0 | |
| TrEMBL | K3ZDY5 | BTB domain-containing protein OS=Setaria italica OX=4555 GN=101786170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0300840, gene-QOZ80_4BG0331550 |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0199930.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_047063, gene-QYE76_055297, gene-QYE76_060667 ... |
| Poaceae | Oryza coarctata | 2 | Oco07G018090, Oco08G017470 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g56460.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G267800 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr10G016540, Chr23G001910, Chr26G017400 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G823800, Tel2E01G845000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG070360, gene_TRIDC2BG076060 |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G500000.1.cds1, TraesCS2B02G513200.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-24472, nbis-gene-6092 |