Basic Information
Locus ID:
nbis-gene-2447
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00002.1 | 4745163 | 4747005 | - | nbis-gene-2447 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 34,187.74 Da | 41.38 | 90.25 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 16 | 315 | 6.6E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 11 | 315 | 2.22E-79 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 4 | 315 | 4.6E-99 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 274 | 316 | 6.3 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 3 | 255 | 5.1E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 3 | 316 | 50.131985 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25900.1 | Homocysteine S-methyltransferase family protein. | 0 |
| RefSeq | XP_004985165.1 | homocysteine S-methyltransferase 1 [Setaria italica] | 0 |
| Q9FUN0 | Homocysteine S-methyltransferase 1 OS=Zea mays OX=4577 GN=HMT-1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5WE11 | Homocysteine S-methyltransferase 1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0003340 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology