Basic Information
Locus ID:
nbis-gene-24315
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00026.1 | 382706 | 384815 | + | nbis-gene-24315 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 45,781.90 Da | 48.61 | 72.21 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00028 | B_lectin | 51 | 169 | 1.9016E-16 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 107 | 192 | 5.2E-19 | IPR001480 |
| Pfam | PF00954 | S-locus glycoprotein domain | 243 | 316 | 1.3E-6 | IPR000858 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 113 | 186 | 1.14E-14 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 417 | 2.67E-11 | IPR011009 |
| Gene3D | G3DSA:2.90.10.10 | - | 37 | 166 | 1.9E-11 | IPR036426 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 357 | 418 | 9.2E-10 | - |
| SMART | SM00108 | blect_4 | 48 | 169 | 3.0E-12 | IPR001480 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 42 | 165 | 11.571123 | IPR001480 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.2 | - | 0 |
| RefSeq | XP_039845868.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Panicum virgatum] | 0 |
| P17840 | S-locus-specific glycoprotein S13 OS=Brassica oleracea OX=3712 GN=SLSG PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9SGI3 | Receptor-like serine/threonine-protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56788 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology