halophFGD

Basic Information

Locus ID: nbis-gene-24196

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Protein FAR1-RELATED SEQUENCE

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00025.1	2803156	2805822	-	nbis-gene-24196

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.95	30,782.58 Da	41.38	65.74	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03101	FAR1 DNA-binding domain	98	172	2.8E-9	IPR004330
MobiDBLite	mobidb-lite	consensus disorder prediction	1	37	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT1G52520.1	FAR1-related sequence 6.
RefSeq	XP_048554667.1	protein FAR1-RELATED SEQUENCE 12-like isoform X2 [Triticum urartu]
Swiss-Prot	Q9SSQ4	Protein FAR1-RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=FRS6 PE=2 SV=1
TrEMBL	A0A8R7PAC7	Protein FAR1-RELATED SEQUENCE OS=Triticum urartu OX=4572 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	20	AH02.3333, AH03.392, AH03.393, AH05.3091, AH05.3154 ... AH06.1427, AH07.1965, AH09.1192, AH09.2132, BH01.1548, BH03.469, BH03.473, BH04.416, BH06.2463, CH03.549, CH03.552, CH04.2304, CH06.815, CH08.962, CH09.2005
Poaceae	Eleusine coracana subsp. coracana	2	gene-QOZ80_3AG0222990, gene-QOZ80_7AG0558080
Poaceae	Hordeum vulgare	17	HORVU.MOREX.r3.1HG0012720.1, HORVU.MOREX.r3.2HG0125760.1 ... HORVU.MOREX.r3.1HG0017340.1.CDS1, HORVU.MOREX.r3.2HG0124780.1.CDS1, HORVU.MOREX.r3.2HG0185260.1.CDS1, HORVU.MOREX.r3.3HG0227170.1, HORVU.MOREX.r3.3HG0237320.1, HORVU.MOREX.r3.3HG0247960.1, HORVU.MOREX.r3.3HG0297050.1, HORVU.MOREX.r3.3HG0306010.1, HORVU.MOREX.r3.4HG0404330.1, HORVU.MOREX.r3.5HG0474110.1, HORVU.MOREX.r3.5HG0488500.1, HORVU.MOREX.r3.5HG0507120.1.CDS1, HORVU.MOREX.r3.5HG0521230.1.CDS1, HORVU.MOREX.r3.6HG0620500.1, HORVU.MOREX.r3.7HG0655580.1
Poaceae	Lolium multiflorum	32	gene-QYE76_003437, gene-QYE76_004211, gene-QYE76_007290 ... gene-QYE76_009042, gene-QYE76_010048, gene-QYE76_010094, gene-QYE76_015096, gene-QYE76_017547, gene-QYE76_019827, gene-QYE76_019993, gene-QYE76_020963, gene-QYE76_021935, gene-QYE76_022612, gene-QYE76_026446, gene-QYE76_027487, gene-QYE76_032783, gene-QYE76_037439, gene-QYE76_039008, gene-QYE76_039696, gene-QYE76_045495, gene-QYE76_049037, gene-QYE76_049130, gene-QYE76_049632, gene-QYE76_052353, gene-QYE76_056855, gene-QYE76_056922, gene-QYE76_058277, gene-QYE76_059131, gene-QYE76_064486, gene-QYE76_067539, gene-QYE76_070635, gene-QYE76_071278
Poaceae	Oryza coarctata	2	Oco01G022990, Oco21G005060
Poaceae	Paspalum vaginatum	6	gene-BS78_02G054600, gene-BS78_02G119200 ... gene-BS78_02G399300, gene-BS78_08G033600, gene-BS78_09G005100, gene-BS78_09G237300
Poaceae	Puccinellia tenuiflora	32	Pt_Chr0103577, Pt_Chr0104921, Pt_Chr0105961, Pt_Chr0106689 ... Pt_Chr0201851, Pt_Chr0202998, Pt_Chr0206940, Pt_Chr0300596, Pt_Chr0300856, Pt_Chr0302380, Pt_Chr0303199, Pt_Chr0304167, Pt_Chr0400389, Pt_Chr0400436, Pt_Chr0402026, Pt_Chr0403098, Pt_Chr0405053, Pt_Chr0501996, Pt_Chr0505681, Pt_Chr0601596, Pt_Chr0603007, Pt_Chr0604070, Pt_Chr0604820, Pt_Chr0604827, Pt_Chr0605296, Pt_Chr0700332, Pt_Chr0701604, Pt_Chr0702472, Pt_Chr0702482, Pt_Chr0703396, Pt_Chr0703649, Pt_Chr0704774
Poaceae	Thinopyrum elongatum	14	Tel1E01G167400, Tel2E01G298800, Tel2E01G330200 ... Tel3E01G899700, Tel5E01G510400, Tel5E01G641600, Tel5E01G799000, Tel6E01G167700, Tel6E01G211700, Tel6E01G432200, Tel6E01G576600, Tel6E01G600500, Tel7E01G082400, Tel7E01G253900
Poaceae	Triticum dicoccoides	101	gene_TRIDC1AG003270, gene_TRIDC1AG016350 ... gene_TRIDC1AG019980, gene_TRIDC1AG048740, gene_TRIDC1AG050310, gene_TRIDC1AG058330, gene_TRIDC1BG001700, gene_TRIDC1BG005390, gene_TRIDC1BG005490, gene_TRIDC1BG037260, gene_TRIDC1BG040810, gene_TRIDC1BG047020, gene_TRIDC1BG055710, gene_TRIDC1BG055880, gene_TRIDC1BG064740, gene_TRIDC1BG071950, gene_TRIDC2AG009100, gene_TRIDC2AG012470, gene_TRIDC2AG016500, gene_TRIDC2AG027600, gene_TRIDC2AG053470, gene_TRIDC2AG060750, gene_TRIDC2AG066680, gene_TRIDC2AG067380, gene_TRIDC2AG072210, gene_TRIDC2BG002030, gene_TRIDC2BG007600, gene_TRIDC2BG014150, gene_TRIDC2BG052210, gene_TRIDC2BG054780, gene_TRIDC2BG076800, gene_TRIDC2BG079670, gene_TRIDC2BG087960, gene_TRIDC2BG089840, gene_TRIDC3AG012750, gene_TRIDC3AG043940, gene_TRIDC3AG061820, gene_TRIDC3AG071170, gene_TRIDC3AG075730, gene_TRIDC3BG004160, gene_TRIDC3BG008700, gene_TRIDC3BG016600, gene_TRIDC3BG027580, gene_TRIDC3BG052290, gene_TRIDC3BG052480, gene_TRIDC3BG061830, gene_TRIDC3BG069560, gene_TRIDC3BG084460, gene_TRIDC4AG004600, gene_TRIDC4AG005180, gene_TRIDC4AG009450, gene_TRIDC4AG015520, gene_TRIDC4AG016370, gene_TRIDC4AG025630, gene_TRIDC4AG052190, gene_TRIDC4AG053080, gene_TRIDC4AG064200, gene_TRIDC4BG005160, gene_TRIDC4BG006430, gene_TRIDC4BG010750, gene_TRIDC4BG015360, gene_TRIDC5AG033180, gene_TRIDC5AG054270, gene_TRIDC5AG070270, gene_TRIDC5AG071610, gene_TRIDC5BG011360, gene_TRIDC5BG027060, gene_TRIDC5BG032180, gene_TRIDC5BG036840, gene_TRIDC5BG041220, gene_TRIDC5BG041240, gene_TRIDC5BG065190, gene_TRIDC5BG076260, gene_TRIDC6AG007550, gene_TRIDC6AG017040, gene_TRIDC6AG017050, gene_TRIDC6AG031930, gene_TRIDC6BG002050, gene_TRIDC6BG023640, gene_TRIDC6BG050790, gene_TRIDC6BG051860, gene_TRIDC6BG059610, gene_TRIDC6BG059740, gene_TRIDC6BG067080, gene_TRIDC6BG071930, gene_TRIDC7AG014200, gene_TRIDC7AG016790, gene_TRIDC7AG018050, gene_TRIDC7AG023170, gene_TRIDC7AG023190, gene_TRIDC7AG025040, gene_TRIDC7AG052530, gene_TRIDC7AG076300, gene_TRIDC7BG028640, gene_TRIDC7BG030520, gene_TRIDC7BG039930, gene_TRIDC7BG054550, gene_TRIDC7BG054650, gene_TRIDC7BG056670, gene_TRIDC7BG061390, gene_TRIDC7BG065830
Poaceae	Triticum aestivum	3	TraesCS1B02G309700.1.cds1, TraesCS2B02G258000.1 ... TraesCS4D02G251300.1
Poaceae	Zoysia japonica	4	nbis-gene-10104, nbis-gene-1713, nbis-gene-23700 ... nbis-gene-24196
Poaceae	Zoysia macrostachya	4	Zma_g19277, Zma_g21030, Zma_g3797, Zma_g4722
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-20003