Basic Information
Locus ID:
nbis-gene-24193
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00025.1 | 2790797 | 2795355 | - | nbis-gene-24193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.66 | 55,578.02 Da | 56.82 | 90.10 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 261 | 379 | 2.6E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 257 | 475 | 2.93E-30 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 384 | 476 | 1.6E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 302 | 383 | 1.4E-11 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 184 | 301 | 8.4E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 219 | 475 | 12.838633 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034588005.1 | protein MALE DISCOVERER 1-like isoform X2 [Setaria viridis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U895 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_35996 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.2078, BH05.2211, CH05.2292 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0369800, gene-QOZ80_5BG0417380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0071920.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_014129 |
| Poaceae | Oryza coarctata | 1 | Oco10G011970 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g39410.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G173600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504591, Pt_Chr0504607 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr01G018700 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G479000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG043980, gene_TRIDC1BG049810 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G296300.2, TraesCS1B02G305200.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb290130_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14208, nbis-gene-24193 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g27025, Zma_g28416 |