Basic Information
Locus ID:
nbis-gene-24190
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00025.1 | 2776747 | 2782358 | + | nbis-gene-24190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.77 | 46,671.62 Da | 24.91 | 94.50 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 50 | 211 | 6.45939E-94 | - |
| CDD | cd02005 | TPP_PDC_IPDC | 267 | 403 | 1.51944E-65 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 268 | 391 | 4.9E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 47 | 214 | 7.6E-36 | IPR012001 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 47 | 223 | 4.16E-44 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 267 | 415 | 7.68E-35 | IPR029061 |
| Gene3D | G3DSA:3.40.50.970 | - | 45 | 220 | 5.3E-61 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 259 | 402 | 3.0E-45 | - |
| Coils | Coil | Coil | 364 | 384 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_025808731.1 | pyruvate decarboxylase 1 [Panicum hallii] | 0 |
| P28516 | Pyruvate decarboxylase 1 OS=Zea mays OX=4577 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5VHQ9 | pyruvate decarboxylase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0014329 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology