Basic Information
Locus ID:
nbis-gene-23827
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00025.1 | 1036854 | 1038491 | + | nbis-gene-23827 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.63 | 38,525.75 Da | 57.90 | 83.36 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 151 | 188 | 1.5E-6 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 174 | 329 | 8.84E-10 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 151 | 338 | 5.9E-15 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 85 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 104 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_002439784.1 | probable LRR receptor-like serine/threonine-protein kinase IRK [Sorghum bicolor] | 0 |
| TrEMBL | M8D2G2 | Uncharacterized protein OS=Aegilops tauschii OX=37682 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology