Basic Information
Locus ID:
nbis-gene-23548
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00024.1 | 2134530 | 2141909 | - | nbis-gene-23548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.43 | 49,692.20 Da | 53.04 | 92.35 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 81 | 137 | 2.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 270 | 402 | 2.6E-8 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 14 | 53 | 1.4E-7 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 14 | 141 | 2.53E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 271 | 417 | 7.13E-21 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 11 | 152 | 9.1E-34 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 260 | 420 | 2.6E-29 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_039840784.1 | protein NSP-INTERACTING KINASE 3-like [Panicum virgatum] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U112 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33294 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | AH05.1121 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0403180, gene-QOZ80_5BG0451600 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-23548 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g26520 |