Basic Information
Locus ID:
nbis-gene-22958
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00023.1 | 1802290 | 1804769 | + | nbis-gene-22958 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.96 | 61,437.39 Da | 53.57 | 82.99 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 381 | 407 | 2.5E-9 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 32 | 119 | 2.8E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 217 | 375 | 8.5E-48 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 23 | 135 | 3.69E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 24 | 147 | 3.6E-12 | IPR011333 |
| SMART | SM00225 | BTB_4 | 32 | 139 | 8.3E-7 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 217 | 498 | 35.3088 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 32 | 103 | 11.150643 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 528 | 549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 555 | - | - |
| Coils | Coil | Coil | 489 | 509 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_039820410.1 | BTB/POZ domain-containing protein At5g03250-like [Panicum virgatum] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TZF6 | NPH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_39811 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology