Basic Information
Locus ID:
nbis-gene-22918
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00023.1 | 1621678 | 1622769 | + | nbis-gene-22918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.89 | 32,049.01 Da | 32.19 | 91.29 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 33 | 102 | 3.75514E-12 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 110 | 222 | 1.40798E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 116 | 224 | 2.3E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 103 | 224 | 7.07E-31 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 30 | 90 | 4.74E-16 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 107 | 224 | 9.3E-34 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 225 | 294 | 3.6E-20 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 106 | 2.3E-11 | IPR008974 |
| SMART | SM00225 | BTB_4 | 124 | 225 | 2.0E-24 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 124 | 190 | 16.672737 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 31 | 86 | 13.078065 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_022684285.1 | BTB/POZ and MATH domain-containing protein 2-like [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6TUD9 | Speckle-type POZ protein-like protein OS=Setaria viridis OX=4556 GN=SEVIR_7G256800v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology