Basic Information
Locus ID:
nbis-gene-22888
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00023.1 | 1486707 | 1489012 | - | nbis-gene-22888 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.42 | 29,602.48 Da | 40.27 | 83.32 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 95 | 152 | 6.7E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 29 | 236 | 1.28E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 29 | 83 | 2.9E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 156 | 224 | 2.0E-5 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 84 | 155 | 1.2E-22 | - |
| SMART | SM00220 | serkin_6 | 47 | 257 | 3.8E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 268 | 13.884548 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 53 | 75 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 119 | 131 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 235 | 268 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039773985.1 | cold-responsive protein kinase 1-like [Panicum virgatum] | 0 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QMC5 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7KG349700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology