Basic Information
Locus ID:
nbis-gene-22582
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
heat shock factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00023.1 | 190327 | 191479 | + | nbis-gene-22582 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 32,355.06 Da | 50.15 | 56.13 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 11 | 100 | 3.6E-33 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 7 | 100 | 8.16E-36 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 5 | 101 | 4.0E-38 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 7 | 100 | 3.9E-56 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 50 | 74 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 49 | 61 | 2.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 62 | 74 | 2.8E-19 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 11 | 34 | 2.8E-19 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 194 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 120 | 156 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 275 | - | - |
| Coils | Coil | Coil | 157 | 190 | - | - |
| Coils | Coil | Coil | 149 | 154 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11660.1 | winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_052152788.1 | heat stress transcription factor B-2a [Oryza glaberrima] | 0 |
| Q7XRX3 | Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2A PE=2 SV=2 | 0 | |
| TrEMBL | A0A6G1BZD7 | HSF_DOMAIN domain-containing protein OS=Oryza meyeriana var. granulata OX=110450 GN=E2562_024202 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology