Basic Information
Locus ID:
nbis-gene-21548
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00021.1 | 1714538 | 1720197 | - | nbis-gene-21548 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 92,138.82 Da | 39.51 | 94.53 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 72 | 110 | 1.0E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 257 | 316 | 1.5E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 497 | 757 | 2.1E-34 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 95 | 323 | 5.51E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 466 | 758 | 5.12E-51 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 346 | 1.2E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 459 | 567 | 5.3E-23 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 70 | 189 | 6.1E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 569 | 762 | 9.9E-37 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 489 | 767 | 27.537991 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 778 | 799 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 861 | 880 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51560.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | NP_001146186.1 | putative leucine-rich repeat protein kinase family protein precursor [Zea mays] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | B7ZZS5 | Leucine-rich repeat protein kinase family protein OS=Zea mays OX=4577 GN=100279756 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology