Basic Information
Locus ID:
nbis-gene-21001
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
ARID/BRIGHT DNA binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00020.1 | 1628787 | 1632023 | - | nbis-gene-21001 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 17,882.55 Da | 50.54 | 56.98 | -1.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 133 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04880.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_025809830.1 | high mobility group B protein 15-like [Panicum hallii] | 0 |
| Q9MAT6 | High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7F5P6 | HMG box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_1G166500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology