Basic Information
Locus ID:
nbis-gene-20739
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00020.1 | 430632 | 434917 | + | nbis-gene-20739 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.37 | 40,369.81 Da | 44.43 | 78.12 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 175 | 328 | 2.6E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 168 | 356 | 6.15E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 170 | 371 | 2.4E-59 | - |
| SMART | SM00220 | serkin_6 | 174 | 372 | 8.9E-48 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 372 | 35.043144 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 180 | 203 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53570.6 | - | 0 |
| RefSeq | XP_039789999.1 | mitogen-activated protein kinase kinase kinase 3-like isoform X2 [Panicum virgatum] | 0 |
| F4HRJ4 | Mitogen-activated protein kinase kinase kinase 3 OS=Arabidopsis thaliana OX=3702 GN=MAPKKK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V2Y9 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_21290 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg17136, jg39666 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_17938 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah027077 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g132530 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg13463, Sbi_jg52406 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg9443 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00023143 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl33778, Sgl39092 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000000656, gene:ENSEOMG00000001278 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0021960, CQ.Regalona.r1.6BG0023150 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30110990 |
| Apiaceae | Apium graveolens | 2 | Ag3G01174, Ag7G02200 |
| Arecaceae | Cocos nucifera | 3 | COCNU_02G011720, COCNU_15G003370, contig69639897G000010 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103711039, gene-LOC103720517 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_02.633.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri17G22230, Ftri6G17484 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G53570.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022608m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g27060.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB02g011410.2N, BniB07g012080.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G1729 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G1789 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno07g02540, gene.Cymno08g06960 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0059s00019.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g12760 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 3 | nbisL1-mrna-10206, nbisL1-mrna-10694, nbisL1-mrna-5271 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.870 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00014231, Pov_00020450 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb1G06374, Lb1G06387, Lb5G27777 |
| Poaceae | Echinochloa crus-galli | 9 | AH07.2197, AH09.1051, BH04.979, BH07.2181, BH09.1130 ... |
| Poaceae | Eleusine coracana subsp. coracana | 7 | gene-QOZ80_2AG0133980, gene-QOZ80_2BG0189490 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.2HG0169650.1, HORVU.MOREX.r3.4HG0346120.2 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_008382, gene-QYE76_044105 |
| Poaceae | Oryza coarctata | 6 | Oco03G012510, Oco04G013820, Oco07G006360, Oco08G006320 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g35010.1, LOC_Os04g35700.1, LOC_Os11g10100.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_04G161600, gene-BS78_05G145500, gene-BS78_K191800 ... |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0103952, Pt_Chr0302613, Pt_Chr0302649 |
| Poaceae | Sporobolus alterniflorus | 7 | Chr07G018490, Chr15G011360, Chr16G011540, Chr17G010790 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G540300, Tel4E01G166400 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC2AG044550, gene_TRIDC2BG047240 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G307100.1, TraesCS2B02G323700.2 ... |
| Poaceae | Zea mays | 4 | Zm00001eb071350_P002, Zm00001eb168730_P005 ... |
| Poaceae | Zoysia japonica | 4 | nbis-gene-20739, nbis-gene-23341, nbis-gene-23347 ... |
| Poaceae | Zoysia macrostachya | 4 | Zma_g17792, Zma_g17793, Zma_g18671, Zma_g21311 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2414, evm.TU.LG17.1459 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g11800, gene.Posoc05g18320 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.900, evm.TU.Scaffold_6_RagTag.1510 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1109 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-11150, nbisL1-mrna-9269 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-22540, nbisL1-mrna-6562 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000011l.920, evm.TU.utg000019l.658 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00007259, Maker00012847 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-15774, nbisL1-mrna-5122 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-19719, nbisL1-mrna-23687 |
| Salicaceae | Populus euphratica | 2 | populus_peu13646, populus_peu22808 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132614984, gene-LOC132627225 |
| Solanaceae | Solanum chilense | 2 | SOLCI001442400, SOLCI004101600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107004855, gene-LOC107018254 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.19610_chr07_+, gene_3399 |
| Tamaricaceae | Tamarix chinensis | 2 | TC04G0357, TC11G0297 |
| Zosteraceae | Zostera marina | 2 | Zosma04g14690.v3.1, Zosma05g10810.v3.1 |