Basic Information
Locus ID:
nbis-gene-20708
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00020.1 | 285366 | 286577 | - | nbis-gene-20708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 42,015.61 Da | 40.34 | 67.67 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 49 | 84 | 5.8E-6 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 196 | 242 | 1.2E-8 | IPR006652 |
| SUPERFAMILY | SSF81383 | F-box domain | 43 | 91 | 2.09E-8 | IPR036047 |
| SUPERFAMILY | SSF117281 | Kelch motif | 115 | 389 | 5.62E-32 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 97 | 401 | 2.2E-28 | IPR015915 |
| SMART | SM00612 | kelc_smart | 159 | 207 | 0.07 | IPR006652 |
| SMART | SM00256 | fbox_2 | 51 | 91 | 7.7E-6 | IPR001810 |
| SMART | SM00612 | kelc_smart | 208 | 255 | 0.12 | IPR006652 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_025794959.1 | F-box/kelch-repeat protein SKIP20-like [Panicum hallii] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | K3Z0B2 | F-box domain-containing protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology