Basic Information
Locus ID:
nbis-gene-20462
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00019.1 | 2770549 | 2774872 | - | nbis-gene-20462 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 65,398.64 Da | 51.66 | 92.44 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 175 | 430 | 1.6E-95 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 2 | 77 | 1.33E-9 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 1 | 96 | 1.7E-7 | IPR011333 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 175 | 454 | 93.607574 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 1 | 60 | 9.806314 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 552 | 586 | - | - |
| Coils | Coil | Coil | 495 | 529 | - | - |
| Coils | Coil | Coil | 561 | 586 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_034572905.1 | BTB/POZ domain-containing protein At1g30440 isoform X1 [Setaria viridis] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9WCA2 | NPH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_05469 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology