Basic Information
Locus ID:
nbis-gene-20435
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00019.1 | 2630569 | 2637327 | + | nbis-gene-20435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.50 | 20,362.74 Da | 50.28 | 71.13 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 68 | 148 | 3.0E-28 | IPR013765 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 67 | 146 | 3.48E-17 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 88 | 156 | 2.5E-17 | IPR027417 |
| ProSiteProfiles | PS50162 | RecA family profile 1. | 96 | 195 | 12.167432 | IPR020588 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79050.2 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_002466766.1 | DNA repair protein recA homolog 1, chloroplastic [Sorghum bicolor] | 0 |
| Q39199 | DNA repair protein recA homolog 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RECA PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WDL2 | Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_05497 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology