Basic Information
Locus ID:
nbis-gene-20192
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
divergent subfamily of APPLE domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00019.1 | 920105 | 922768 | - | nbis-gene-20192 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 10,738.13 Da | 28.92 | 97.47 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 20 | 95 | 1.7E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 95 | 1.13E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 11 | 95 | 2.0E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 95 | 18.690107 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 51 | 63 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23190.2 | - | 0 |
| RefSeq | XP_025797990.1 | receptor-like serine/threonine-protein kinase SD1-8 [Panicum hallii] | 0 |
| Q8H199 | Cysteine-rich receptor-like protein kinase 14 OS=Arabidopsis thaliana OX=3702 GN=CRK14 PE=2 SV=2 | 0 | |
| TrEMBL | Q8H8P1 | Putative receptor-like kinase, 5'-partial (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0057E11.25 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2136 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003627, Ah017478, Ah017734, Ah031514 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011440, GOSA_00012107 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033066 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30065570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1043300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG082020, gene_TRIDC3BG079770 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-11728, nbis-gene-20192, nbis-gene-22941 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-26558, nbisL1-mrna-29828 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12602, nbisL1-mrna-24800 |
| Salicaceae | Populus euphratica | 1 | populus_peu27963 |