halophFGD

Basic Information

Locus ID: nbis-gene-20071

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00018.1	3555295	3560914	+	nbis-gene-20071

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.71	113,187.60 Da	52.08	93.66	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF08263	Leucine rich repeat N-terminal domain	323	362	2.1E-10	IPR013210
Pfam	PF03109	ABC1 family	946	986	2.2E-4	IPR004147
Pfam	PF13855	Leucine rich repeat	768	826	1.8E-10	IPR001611
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	917	986	3.46E-8	IPR011009
SUPERFAMILY	SSF52058	L domain-like	325	532	1.84E-32	-
SUPERFAMILY	SSF52058	L domain-like	571	853	1.59E-71	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	917	998	3.5E-12	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	472	867	1.5E-111	IPR032675
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	321	471	3.6E-32	IPR032675
SMART	SM00369	LRR_typ_2	765	788	170.0	IPR003591
SMART	SM00369	LRR_typ_2	392	416	19.0	IPR003591
SMART	SM00369	LRR_typ_2	789	813	21.0	IPR003591
SMART	SM00369	LRR_typ_2	670	694	14.0	IPR003591
SMART	SM00369	LRR_typ_2	622	646	20.0	IPR003591
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	947	969	-	IPR017441
PRINTS	PR00019	Leucine-rich repeat signature	789	802	1.3E-5	-
PRINTS	PR00019	Leucine-rich repeat signature	768	781	1.3E-5	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding) GO:0005524 (ATP binding)

KEGG Pathway

KO Term:

K04730 (interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G24130.2	-
RefSeq	XP_039795256.1	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Panicum virgatum]
Swiss-Prot	Q9ZUI0	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana OX=3702 GN=At2g24130 PE=3 SV=1
TrEMBL	A0A3L6TB33	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM03G34940 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg13455, jg18317, jg18318
Amaranthaceae	Atriplex hortensis	1	Ah014930
Amaranthaceae	Beta vulgaris	1	BVRB_8g191580
Amaranthaceae	Suaeda aralocaspica	1	GOSA_00022289
Amaranthaceae	Suaeda glauca	3	Sgl42636, Sgl42647, Sgl47381
Amaranthaceae	Chenopodium album	3	gene:ENSEOMG00000011470, gene:ENSEOMG00000033192 ... gene:ENSEOMG00000044662
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.8AG0017140, CQ.Regalona.r1.8BG0018180
Anacardiaceae	Pistacia vera	7	pistato.v30130240, pistato.v30130350, pistato.v30130390 ... pistato.v30130430, pistato.v30130480, pistato.v30130490, pistato.v30265000
Apiaceae	Apium graveolens	4	Ag2G00387, Ag4G00069, Ag5G00190, Ag5G00191
Arecaceae	Cocos nucifera	5	COCNU_01G004660, COCNU_01G004670, COCNU_11G012220 ... COCNU_11G012230, COCNU_11G012240
Arecaceae	Phoenix dactylifera	3	gene-LOC103707436, gene-LOC103707465, gene-LOC103710481
Asparagaceae	Asparagus officinalis	2	AsparagusV1_04.2495.V1.1, AsparagusV1_04.2496.V1.1
Asteraceae	Flaveria trinervia	2	Ftri10G27944, Ftri14G08983
Brassicaceae	Arabidopsis thaliana	1	AT2G24130.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10000545m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp4g03080.v2.2
Brassicaceae	Brassica nigra	1	BniB02g021770.2N
Casuarinaceae	Casuarina equisetifolia	6	Ceq02G0425, Ceq02G0426, Ceq02G0427, Ceq02G0428, Ceq02G0429 ... Ceq03G2607
Casuarinaceae	Casuarina glauca	5	Cgl02G0450, Cgl02G0451, Cgl02G0452, Cgl02G0455, Cgl03G2756
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno01g07230, gene.Cymno06g07460
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate04g10090, gene.Thate04g24940
Plantaginaceae	Plantago ovata	3	Pov_00000769, Pov_00020111, Pov_00020113
Poaceae	Echinochloa crus-galli	9	AH03.1964, AH06.578, AH06.579, AH06.580, BH06.633, CH03.2296 ... CH06.644, CH06.645, CH06.646
Poaceae	Eleusine coracana subsp. coracana	8	gene-QOZ80_6AG0511660, gene-QOZ80_6AG0511670 ... gene-QOZ80_6AG0511680, gene-QOZ80_6AG0535580, gene-QOZ80_6BG0463570, gene-QOZ80_6BG0463580, gene-QOZ80_6BG0463590, gene-QOZ80_6BG0489100
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.5HG0482640.1, HORVU.MOREX.r3.7HG0636440.1 ... HORVU.MOREX.r3.7HG0659600.1.CDS1, HORVU.MOREX.r3.7HG0659610.1
Poaceae	Lolium multiflorum	5	gene-QYE76_005297, gene-QYE76_009156, gene-QYE76_009158 ... gene-QYE76_028155, gene-QYE76_028156
Poaceae	Oryza coarctata	6	Oco05G008780, Oco12G004020, Oco12G004030, Oco12G004040 ... Oco17G005200, Oco18G005220
Poaceae	Oryza sativa	4	LOC_Os06g08680.1, LOC_Os06g08690.1, LOC_Os06g08710.1 ... LOC_Os09g25540.1
Poaceae	Paspalum vaginatum	4	gene-BS78_02G186600, gene-BS78_10G067900 ... gene-BS78_10G068000, gene-BS78_10G068100
Poaceae	Puccinellia tenuiflora	3	Pt_Chr0405211, Pt_Chr0702146, Pt_Chr0705307
Poaceae	Sporobolus alterniflorus	1	Chr10G009720
Poaceae	Thinopyrum elongatum	6	Tel5E01G363600, Tel5E01G363700, Tel7E01G042700 ... Tel7E01G043000, Tel7E01G306500, Tel7E01G306600
Poaceae	Triticum dicoccoides	6	gene_TRIDC5AG035640, gene_TRIDC5BG037490 ... gene_TRIDC7AG018500, gene_TRIDC7AG018510, gene_TRIDC7BG007950, gene_TRIDC7BG007960
Poaceae	Triticum aestivum	15	TraesCS4A02G473300.1.cds1, TraesCS5A02G222200.1 ... TraesCS5A02G222300.1, TraesCS5B02G221100.1, TraesCS5B02G221200.1.cds1, TraesCS5D02G230000.1, TraesCS5D02G230100.1.cds1, TraesCS7A02G018300.1, TraesCS7A02G150600.1, TraesCS7A02G150700.1, TraesCS7B02G054500.1, TraesCS7B02G054600.1, TraesCS7D02G015600.1, TraesCS7D02G152500.1, TraesCS7D02G152600.1
Poaceae	Zea mays	5	Zm00001eb099720_P001, Zm00001eb278310_P001 ... Zm00001eb313280_P001, Zm00001eb374480_P001, Zm00001eb374500_P001
Poaceae	Zoysia japonica	3	nbis-gene-20071, nbis-gene-34902, nbis-gene-34903
Poaceae	Zoysia macrostachya	3	Zma_g31487, Zma_g31488, Zma_g32393
Portulacaceae	Portulaca oleracea	3	evm.TU.LG02.2411, evm.TU.LG18.1000, evm.TU.LG23.633
Posidoniaceae	Posidonia oceanica	3	gene.Posoc01g19060, gene.Posoc03g13270, gene.Posoc03g13280
Rhizophoraceae	Bruguiera sexangula	1	evm.TU.Scaffold_10_RagTag.181
Rhizophoraceae	Carallia pectinifolia	4	nbisL1-mrna-13405, nbisL1-mrna-13406, nbisL1-mrna-7237 ... nbisL1-mrna-7258
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-21239, nbisL1-mrna-2361
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-16606, nbisL1-mrna-16607
Rhizophoraceae	Kandelia candel	2	add.evm.TU.utg000033l.38, evm.TU.utg000005l.303
Rhizophoraceae	Rhizophora apiculata	1	nbisL1-mrna-16650
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-14566
Salicaceae	Populus euphratica	4	populus_peu04128, populus_peu12203, populus_peu14360 ... populus_peu34951
Solanaceae	Lycium barbarum	3	gene-LOC132601350, gene-LOC132602061, gene-LOC132602182
Solanaceae	Solanum chilense	1	SOLCI004191500
Solanaceae	Solanum pennellii	1	gene-LOC107025451
Zosteraceae	Zostera marina	1	Zosma03g06600.v3.1