Basic Information
Locus ID:
nbis-gene-19971
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Bromo adjacent homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00018.1 | 3006693 | 3009201 | + | nbis-gene-19971 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 22,724.34 Da | 46.95 | 57.04 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04714 | BAH_BAHCC1 | 50 | 184 | 8.25832E-57 | - |
| Pfam | PF01426 | BAH domain | 52 | 163 | 4.0E-22 | IPR001025 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 160 | 191 | 6.72E-7 | IPR011011 |
| Gene3D | G3DSA:2.30.30.490 | - | 41 | 160 | 4.1E-29 | IPR043151 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 161 | 194 | 8.7E-7 | IPR013083 |
| SMART | SM00439 | BAH_4 | 49 | 164 | 3.6E-40 | IPR001025 |
| ProSiteProfiles | PS51038 | BAH domain profile. | 49 | 164 | 23.069056 | IPR001025 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22140.2 | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein. | 0 |
| RefSeq | XP_039795094.1 | chromatin remodeling protein EBS-like isoform X2 [Panicum virgatum] | 0 |
| F4JL28 | Chromatin remodeling protein EBS OS=Arabidopsis thaliana OX=3702 GN=EBS PE=1 SV=1 | 0 | |
| TrEMBL | A0A804QB44 | BAH domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology