Basic Information
Locus ID:
nbis-gene-19915
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Major Facilitator Superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00018.1 | 2766630 | 2775476 | + | nbis-gene-19915 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 126,141.21 Da | 55.22 | 77.00 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 873 | 1095 | 7.4E-13 | IPR011701 |
| Pfam | PF05678 | VQ motif | 286 | 313 | 4.0E-13 | IPR008889 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 766 | 1150 | 1.31E-26 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 860 | 1150 | 2.4E-15 | IPR036259 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 292 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 88 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 521 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 248 | 263 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 124 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10190.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_039834534.1 | uncharacterized protein LOC120695318 [Panicum virgatum] | 0 |
| Q9LIE6 | VQ motif-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=VQ22 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9TDC7 | MFS domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_42808 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology