Basic Information
Locus ID:
nbis-gene-19558
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00018.1 | 1087170 | 1089631 | - | nbis-gene-19558 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.29 | 41,564.53 Da | 49.88 | 80.63 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 34 | 81 | 5.4E-14 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 169 | 272 | 1.1E-20 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 280 | 4.49E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 33 | 78 | 7.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 274 | 1.2E-33 | - |
| SMART | SM00220 | serkin_6 | 6 | 272 | 5.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 272 | 30.096245 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 51 | 63 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 137 | 158 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55910.1 | D6 protein kinase. D6PK is a protein kinase involved that plays a role in polar auxin transport. Most likely acts redundantly with the related proteins: D6PKL1,D6PKL2,and D6PKL3. PIN1 is a target of D6PK phosphorylation. | 0 |
| RefSeq | XP_004957126.1 | serine/threonine-protein kinase D6PK [Setaria italica] | 0 |
| A2YBX5 | Protein kinase G11A OS=Oryza sativa subsp. indica OX=39946 GN=OsI_021818 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811N472 | Protein kinase domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS12658 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg3253 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21601 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30022530, pistato.v30248550, pistato.v30266150 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0243780.1 |
| Poaceae | Oryza coarctata | 1 | Oco03G020330 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G012270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G373000 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-19558, nbis-gene-3627, nbis-gene-57387 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.937 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-25123, nbisL1-mrna-30082 |