Basic Information
Locus ID:
nbis-gene-19496
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00018.1 | 873001 | 874518 | - | nbis-gene-19496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.78 | 54,880.06 Da | 54.09 | 76.36 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 66 | 231 | 4.6E-28 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 340 | 444 | 4.4E-19 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 482 | 5.32E-66 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 332 | 463 | 1.2E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 58 | 249 | 2.3E-36 | - |
| SMART | SM00220 | serkin_6 | 63 | 444 | 4.4E-67 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 63 | 444 | 39.848705 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 192 | 204 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 69 | 99 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 259 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 243 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G20830.1 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_004957172.1 | serine/threonine-protein kinase UCNL [Setaria italica] | 0 |
| Q9LT38 | Serine/threonine-protein kinase UCNL OS=Arabidopsis thaliana OX=3702 GN=UCNL PE=2 SV=1 | 0 | |
| TrEMBL | A0A368Q2W5 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G252400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg35537, jg8581 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_11656 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004953 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_4g072270 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg17950, Sbi_jg62579 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1154 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00007087 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl23898, Sgl29067 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010429, gene:ENSEOMG00000028221 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.4AG0001090, CQ.Regalona.r1.4BG0001220 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30049880 |
| Apiaceae | Apium graveolens | 1 | Ag9G01432 |
| Arecaceae | Cocos nucifera | 2 | COCNU_01G012050, COCNU_11G006870 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103696656, gene-LOC103711375, gene-LOC120111341 |
| Asteraceae | Flaveria trinervia | 3 | Ftri16G16543, Ftri2G31189, Ftri6G27573 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G51170.1, AT3G20830.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10011554m.g.v1.0, Thhalv10020828m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp1g37910.v2.2, Sp3g18850.v2.2, Sp4g07020.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g042880.2N, BniB04g059000.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G1993 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl05G1981 |
| Cymodoceaceae | Cymodocea nodosa | 3 | gene.Cymno01g05700, gene.Cymno05g08300, gene.Cymno06g08990 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g08480 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-378 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG09.273 |
| Poaceae | Echinochloa crus-galli | 6 | AH03.2385, AH08.2008, BH03.2513, BH08.2108, CH03.2708 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_6AG0539530, gene-QOZ80_6BG0492920 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.5HG0490610.1.CDS1 ... |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_006145, gene-QYE76_029931, gene-QYE76_029959 |
| Poaceae | Oryza coarctata | 4 | Oco15G011410, Oco16G011170, Oco17G007840, Oco18G008050 |
| Poaceae | Oryza sativa | 2 | LOC_Os08g39460.1, LOC_Os09g31210.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_02G223000, gene-BS78_07G182900 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr10G007350, Chr11G012000, Chr16G016880, Chr17G016220 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel5E01G423600, Tel7E01G432500 |
| Poaceae | Triticum dicoccoides | 4 | gene_TRIDC5AG019520, gene_TRIDC5BG043590 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS5A02G263600.1.cds1, TraesCS5B02G263000.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb034780_P001, Zm00001eb101850_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-17385, nbis-gene-19496, nbis-gene-42542 |
| Poaceae | Zoysia macrostachya | 4 | Zma_g23217, Zma_g24331, Zma_g30535, Zma_g32783 |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG08.1703, evm.TU.LG18.1795, evm.TU.LG19.1066 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc01g17320, gene.Posoc03g10410 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_12_RagTag.3, evm.TU.Scaffold_13_RagTag.1069 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-24797, nbisL1-mrna-29954 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-3558, nbisL1-mrna-6446 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-16435, nbisL1-mrna-19319 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000015l.275, add.evm.TU.utg000027l.274 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00015337, Maker00018195 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-18546, nbisL1-mrna-18886 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-11548, nbisL1-mrna-20732 |
| Salicaceae | Populus euphratica | 2 | populus_peu04342, populus_peu35142 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132643822 |
| Solanaceae | Solanum chilense | 1 | SOLCI006856800 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107003178 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4952 |
| Tamaricaceae | Tamarix chinensis | 1 | TC02G3728 |
| Zosteraceae | Zostera marina | 1 | Zosma03g07820.v3.1 |