Basic Information
Locus ID:
nbis-gene-1945
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00002.1 | 2659077 | 2665105 | + | nbis-gene-1945 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.16 | 60,008.27 Da | 35.14 | 91.45 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00899 | ThiF family | 224 | 437 | 9.6E-20 | IPR000594 |
| Pfam | PF00899 | ThiF family | 27 | 175 | 1.7E-23 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 348 | 380 | 9.3E-10 | IPR019572 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 280 | 347 | 1.3E-23 | IPR019572 |
| Pfam | PF09358 | Ubiquitin fold domain | 451 | 540 | 1.8E-23 | IPR018965 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 20 | 225 | 1.44E-57 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 226 | 435 | 1.31E-39 | IPR035985 |
| Gene3D | G3DSA:1.10.10.2660 | - | 348 | 387 | 1.5E-13 | IPR042063 |
| Gene3D | G3DSA:1.10.10.2660 | - | 224 | 347 | 9.4E-24 | IPR042063 |
| Gene3D | G3DSA:3.40.50.720 | - | 11 | 206 | 1.6E-55 | - |
| Gene3D | G3DSA:3.10.290.60 | - | 453 | 543 | 5.0E-21 | IPR038252 |
| SMART | SM00985 | UBA_e1_C_a_2 | 418 | 540 | 7.1E-44 | IPR018965 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 162 | 189 | 2.2E-23 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 47 | 71 | 2.2E-23 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_022678806.1 | ubiquitin-activating enzyme E1 3 isoform X1 [Setaria italica] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WF91 | E1 ubiquitin-activating enzyme (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_07002 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology