Basic Information
Locus ID:
nbis-gene-19073
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00017.1 | 2716414 | 2718283 | - | nbis-gene-19073 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.55 | 50,370.05 Da | 53.60 | 96.92 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 44 | 264 | 1.93586E-75 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 43 | 273 | 1.2E-48 | IPR001220 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 432 | 4.07E-14 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 32 | 265 | 3.31E-51 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 34 | 274 | 4.9E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 337 | 395 | 2.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 396 | 433 | 3.0E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 474 | 9.503008 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 412 | 424 | - | IPR008271 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 151 | 157 | - | IPR019825 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42120.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_002451916.1 | L-type lectin-domain containing receptor kinase S.6 [Sorghum bicolor] | 0 |
| A0A0P0VIP0 | L-type lectin-domain containing receptor kinase S.7 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRKS7 PE=1 SV=1 | 0 | |
| TrEMBL | C5XZK9 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3004G118800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology