halophFGD

Basic Information

Locus ID: nbis-gene-19025

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: Inositol polyphosphate phosphatase, catalytic domain homologues

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00017.1	2483120	2488237	-	nbis-gene-19025

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.81	53,778.70 Da	41.77	91.11	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03372	Endonuclease/Exonuclease/phosphatase family	258	400	3.9E-8	IPR005135
SUPERFAMILY	SSF56219	DNase I-like	231	459	8.11E-27	IPR036691
SUPERFAMILY	SSF50978	WD40 repeat-like	29	232	1.26E-15	IPR036322
Gene3D	G3DSA:3.60.10.10	Endonuclease/exonuclease/phosphatase	383	471	1.6E-21	IPR036691
Gene3D	G3DSA:2.130.10.10	-	40	234	8.0E-13	IPR015943
Gene3D	G3DSA:3.60.10.10	Endonuclease/exonuclease/phosphatase	235	382	7.8E-25	IPR036691
SMART	SM00320	WD40_4	188	225	110.0	IPR001680
SMART	SM00320	WD40_4	109	147	60.0	IPR001680
SMART	SM00320	WD40_4	149	186	1.5	IPR001680
SMART	SM00128	i5p_5	251	474	9.5E-8	IPR000300

Gene Ontology

Biological Process:

GO:0046856 (phosphatidylinositol dephosphorylation)

Molecular Function:

GO:0003824 (catalytic activity) GO:0005515 (protein binding) GO:0016791 (phosphatase activity)

KEGG Pathway

KO Term:

K01099 (inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36])

Pathway:

ko00562 (Inositol phosphate metabolism) map00562 (Inositol phosphate metabolism) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko04070 (Phosphatidylinositol signaling system) map04070 (Phosphatidylinositol signaling system)

Reaction:

R04404 (1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate + H2O <=> 1-Phosphatidyl-1D-myo-inositol 4-phosphate + Orthophosphate) R09827 (Phosphatidylinositol-3,4,5-trisphosphate + H2O <=> 1-Phosphatidyl-1D-myo-inositol 3,4-bisphosphate + Orthophosphate)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G43900.1	Endonuclease/exonuclease/phosphatase family protein.
RefSeq	XP_039789616.1	type II inositol polyphosphate 5-phosphatase 15-like [Panicum virgatum]
Swiss-Prot	O80560	Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2
TrEMBL	A0A0A9D7E2	IPPc domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg10935, jg13306, jg9842
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10156, gene_15743
Amaranthaceae	Atriplex hortensis	2	Ah005139, Ah019686
Amaranthaceae	Beta vulgaris	2	BVRB_3g059200, BVRB_4g074530
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17390, Sbi_jg4979, Sbi_jg62040, Sbi_jg6737
Amaranthaceae	Salicornia europaea	2	Seu_jg12919, Seu_jg653
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00003781, GOSA_00015543
Amaranthaceae	Suaeda glauca	3	Sgl00555, Sgl05568, Sgl29457
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000009152, gene:ENSEOMG00000011754 ... gene:ENSEOMG00000030495, gene:ENSEOMG00000031261, gene:ENSEOMG00000043375
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.3AG0011590, CQ.Regalona.r1.3BG0011710 ... CQ.Regalona.r1.4AG0002820, CQ.Regalona.r1.4BG0002950
Anacardiaceae	Pistacia vera	2	pistato.v30038890, pistato.v30221410
Apiaceae	Apium graveolens	4	Ag11G03690, Ag1G00046, Ag5G02750, Ag8G01299
Arecaceae	Cocos nucifera	3	COCNU_02G008130, COCNU_11G002360, scaffold003697G000020
Arecaceae	Phoenix dactylifera	2	gene-LOC103715204, gene-LOC103722592
Asparagaceae	Asparagus officinalis	3	AsparagusV1_04.2040.V1.1, AsparagusV1_09.1682.V1.1 ... AsparagusV1_10.1295.V1.1
Asteraceae	Flaveria trinervia	3	Ftri11G14531, Ftri12G01313, Ftri17G01218
Brassicaceae	Arabidopsis thaliana	4	AT1G05630.1, AT1G65580.1, AT2G31830.2, AT2G43900.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10001286m.g.v1.0, Thhalv10006606m.g.v1.0 ... Thhalv10016160m.g.v1.0, Thhalv10018032m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g04480.v2.2, Sp4g14110.v2.2, Sp4g25990.v2.2 ... Sp5g20500.v2.2
Brassicaceae	Brassica nigra	6	BniB02g002460.2N, BniB03g001430.2N, BniB03g043170.2N ... BniB06g020860.2N, BniB06g044930.2N, BniB08g028680.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G1376, Ceq07G0258
Casuarinaceae	Casuarina glauca	2	Cgl06G1442, Cgl07G0246
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno02g00160, gene.Cymno05g06360
Dunaliellaceae	Dunaliella salina	1	Dusal.0256s00010.v1.0
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate06g19970, gene.Thate07g00050
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG11.465, evm.TU.LG12.230
Plantaginaceae	Plantago ovata	2	Pov_00025077, Pov_00038862
Plumbaginaceae	Limonium bicolor	5	Lb0G37887, Lb1G04267, Lb3G21174, Lb3G21179, Lb7G33447
Poaceae	Echinochloa crus-galli	9	AH03.2483, AH07.1752, AH08.2122, BH03.2624, BH07.1738 ... BH08.2235, CH03.2833, CH07.1593, CH08.2417
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_2AG0130870, gene-QOZ80_2BG0186120 ... gene-QOZ80_6AG0540400, gene-QOZ80_6BG0493710, gene-QOZ80_8AG0637880, gene-QOZ80_8BG0666350
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.4HG0391200.1, HORVU.MOREX.r3.5HG0492850.1 ... HORVU.MOREX.r3.7HG0682490.1
Poaceae	Lolium multiflorum	5	gene-QYE76_006399, gene-QYE76_007935, gene-QYE76_022112 ... gene-QYE76_030171, gene-QYE76_030180
Poaceae	Oryza coarctata	4	Oco04G010650, Oco15G010510, Oco17G008570, Oco18G008650
Poaceae	Oryza sativa	3	LOC_Os02g27620.1, LOC_Os08g41270.1, LOC_Os09g32440.1
Poaceae	Paspalum vaginatum	3	gene-BS78_02G230200, gene-BS78_04G134500 ... gene-BS78_07G197100
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0201854, Pt_Chr0201855, Pt_Chr0403701, Pt_Chr0403706 ... Pt_Chr0701510, Pt_Chr0701518
Poaceae	Sporobolus alterniflorus	8	Chr06G011620, Chr0G001140, Chr10G014860, Chr11G007380 ... Chr14G016580, Chr15G013370, Chr20G001560, Chr29G001930
Poaceae	Thinopyrum elongatum	3	Tel4E01G385300, Tel5E01G444100, Tel7E01G451100
Poaceae	Triticum dicoccoides	6	gene_TRIDC4AG011340, gene_TRIDC4BG039110 ... gene_TRIDC5AG041860, gene_TRIDC5BG045790, gene_TRIDC7AG033000, gene_TRIDC7BG024130
Poaceae	Triticum aestivum	9	TraesCS4A02G082700.1, TraesCS4B02G221300.1 ... TraesCS4D02G221700.1, TraesCS5A02G278100.1, TraesCS5B02G277500.1, TraesCS5D02G285100.2, TraesCS7A02G255500.2, TraesCS7B02G151900.2, TraesCS7D02G253900.2
Poaceae	Zea mays	5	Zm00001eb035960_P003, Zm00001eb102240_P001 ... Zm00001eb174880_P001, Zm00001eb241060_P002, Zm00001eb317410_P001
Poaceae	Zoysia japonica	5	nbis-gene-10393, nbis-gene-19025, nbis-gene-19426 ... nbis-gene-42651, nbis-gene-55974
Poaceae	Zoysia macrostachya	5	Zma_g16318, Zma_g23287, Zma_g30580, Zma_g30581, Zma_g32832
Portulacaceae	Portulaca oleracea	7	evm.TU.LG04.792, evm.TU.LG05.2137, evm.TU.LG06.1545 ... evm.TU.LG08.1384, evm.TU.LG11.900, evm.TU.LG15.1489, evm.TU.LG22.282
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g12210, gene.Posoc02g34630
Rhizophoraceae	Bruguiera sexangula	3	evm.TU.Scaffold_11_RagTag.1519, evm.TU.Scaffold_6_RagTag.543 ... evm.TU.Scaffold_3_RagTag.1563
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-12811, nbisL1-mrna-15472
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15837, nbisL1-mrna-20489
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-22522, nbisL1-mrna-435, nbisL1-mrna-436
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000010l.464, evm.TU.utg000011l.302 ... evm.TU.utg000019l.289
Rhizophoraceae	Kandelia obovata	3	Maker00001975, Maker00006896, Maker00008896
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-1177, nbisL1-mrna-13775, nbisL1-mrna-5393
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-12932, nbisL1-mrna-20459, nbisL1-mrna-3705
Salicaceae	Populus euphratica	4	populus_peu06647, populus_peu20538, populus_peu22459 ... populus_peu23863
Solanaceae	Lycium barbarum	3	gene-LOC132604308, gene-LOC132609280, gene-LOC132616131
Solanaceae	Solanum chilense	2	SOLCI002246200, SOLCI003029900
Solanaceae	Solanum pennellii	5	gene-LOC107004647, gene-LOC107005773, gene-LOC107006083 ... gene-LOC107024969, gene-LOC107028043
Tamaricaceae	Reaumuria soongarica	3	STRG.28005_chr04_-, gene_12475, gene_6447
Tamaricaceae	Tamarix chinensis	3	TC01G1323, TC02G2976, TC12G1828
Zosteraceae	Zostera marina	3	Zosma01g32200.v3.1, Zosma03g17510.v3.1, Zosma04g26790.v3.1