Basic Information
Locus ID:
nbis-gene-19022
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00017.1 | 2471583 | 2472680 | + | nbis-gene-19022 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.30 | 38,751.32 Da | 59.04 | 80.96 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 95 | 326 | 1.5E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 332 | 1.09E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 346 | 1.8E-44 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 326 | 23.523935 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 68 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 48 | 75 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12020.10 | - | 0 |
| RefSeq | XP_034592319.1 | putative cyclin-dependent kinase F-2 [Setaria viridis] | 0 |
| Q9JHU3 | Cyclin-dependent kinase 20 OS=Mus musculus OX=10090 GN=Cdk20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6WCJ5 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_1G134100v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_2AG0130860, gene-QOZ80_5AG0362100 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-19022 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24853 |