HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: nbis-gene-18427
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: Protein of unknown function (DUF 659)
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00016.1 3796481 3796915 - nbis-gene-18427
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.79 12,847.16 Da 50.90 74.70 -0.48
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF53098 Ribonuclease H-like 3 41 1.97E-6 IPR012337
Best hit
Source Best Hit ID Description E-value
RefSeq XP_035822325.1 uncharacterized protein LOC118476764 [Zea mays] 0
TrEMBL A0A0A9RPG7 Dimer_Tnp_hAT domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Poaceae Sporobolus alterniflorus 3 Chr04G006240, Chr04G025720, Chr07G004450
Poaceae Zea mays 1 Zm00001eb307380_P001
Poaceae Zoysia japonica 21 nbis-gene-1111, nbis-gene-13247, nbis-gene-14314 ...
nbis-gene-14531, nbis-gene-18427, nbis-gene-20806, nbis-gene-28808, nbis-gene-28852, nbis-gene-29795, nbis-gene-30435, nbis-gene-3293, nbis-gene-35914, nbis-gene-38854, nbis-gene-42305, nbis-gene-42431, nbis-gene-45646, nbis-gene-49028, nbis-gene-49408, nbis-gene-57813, nbis-gene-57868, nbis-gene-989
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.