Basic Information
Locus ID:
nbis-gene-18401
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00016.1 | 3704417 | 3708541 | - | nbis-gene-18401 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.21 | 71,299.63 Da | 45.44 | 95.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00244 | 14-3-3 protein | 55 | 159 | 2.0E-14 | IPR023410 |
| SUPERFAMILY | SSF52047 | RNI-like | 385 | 514 | 1.73E-8 | - |
| SUPERFAMILY | SSF48445 | 14-3-3 protein | 55 | 175 | 2.88E-13 | IPR036815 |
| SUPERFAMILY | SSF81383 | F-box domain | 267 | 302 | 6.93E-5 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 267 | 607 | 7.9E-7 | IPR032675 |
| Gene3D | G3DSA:1.20.190.20 | - | 50 | 165 | 1.1E-17 | IPR036815 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 70 | 99 | 1.7E-7 | IPR000308 |
| PRINTS | PR00305 | 14-3-3 protein zeta signature | 120 | 144 | 1.7E-7 | IPR000308 |
| Coils | Coil | Coil | 161 | 214 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025805771.1 | uncharacterized protein LOC112884573 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9VDB8 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_25269 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 7 | AH03.3573, AH05.688, BH03.3781, CH03.3284, CH03.4006 ... |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_1AG0005700, gene-QOZ80_1BG0054350 ... |
| Poaceae | Hordeum vulgare | 3 | HORVU.MOREX.r3.2HG0204110.1, HORVU.MOREX.r3.5HG0531250.1 ... |
| Poaceae | Lolium multiflorum | 10 | gene-QYE76_013401, gene-QYE76_035003, gene-QYE76_035004 ... |
| Poaceae | Oryza coarctata | 4 | Oco02G006680, Oco02G006740, Oco10G000410, Oco10G010300 |
| Poaceae | Oryza sativa | 5 | LOC_Os01g14270.1, LOC_Os05g01620.1, LOC_Os05g39660.1 ... |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G001500 |
| Poaceae | Puccinellia tenuiflora | 15 | Pt_Chr0102173, Pt_Chr0102191, Pt_Chr0102968, Pt_Chr0105483 ... |
| Poaceae | Thinopyrum elongatum | 16 | Tel1E01G111800, Tel2E01G973400, Tel3E01G038200 ... |
| Poaceae | Triticum dicoccoides | 15 | gene_TRIDC1AG002220, gene_TRIDC2AG078630 ... |
| Poaceae | Triticum aestivum | 46 | TraesCS1A02G022900.1, TraesCS1A02G051600.1 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-18401 |