Basic Information
Locus ID:
nbis-gene-17975
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00016.1 | 1619557 | 1623448 | + | nbis-gene-17975 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.30 | 21,970.00 Da | 47.27 | 88.98 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 119 | 200 | 2.2E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 202 | 1.35E-24 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 82 | 190 | 1.2E-28 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 115 | 205 | 14.647784 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 121 | 150 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 81 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 56 | 74 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58690.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002440781.1 | probable serine/threonine-protein kinase PBL23 [Sorghum bicolor] | 0 |
| Q84M95 | Probable serine/threonine-protein kinase PBL28 OS=Arabidopsis thaliana OX=3702 GN=PBL28 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9U0G9 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_33001 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 5 | Sgl13376, Sgl18579, Sgl25780, Sgl30922, Sgl82031 |
| Apiaceae | Apium graveolens | 1 | Ag4G01746 |
| Arecaceae | Cocos nucifera | 1 | COCNU_06G005540 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17975 |