Basic Information
Locus ID:
nbis-gene-17593
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Heat stress transcription factor B-2b
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00015.1 | 3899096 | 3903360 | - | nbis-gene-17593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.58 | 55,607.88 Da | 75.40 | 65.57 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 188 | 277 | 1.1E-32 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 185 | 277 | 1.32E-34 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 180 | 278 | 1.4E-37 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 184 | 277 | 3.0E-60 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 227 | 251 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 239 | 251 | 6.7E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 226 | 238 | 6.7E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 188 | 211 | 6.7E-20 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 346 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 310 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 154 | 174 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 107 | 181 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 517 | - | - |
| Coils | Coil | Coil | 345 | 368 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62020.1 | heat shock transcription factor B2A. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_008677301.1 | uncharacterized protein LOC100283530 isoform X2 [Zea mays] | 0 |
| Q6Z9C8 | Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1 | 0 | |
| TrEMBL | B6TJ68 | Heat shock factor protein 7 OS=Zea mays OX=4577 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology