Basic Information
Locus ID:
nbis-gene-17552
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CERK1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00015.1 | 3730981 | 3735670 | + | nbis-gene-17552 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 55,678.57 Da | 30.44 | 86.46 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 192 | 225 | 0.00847052 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 298 | 426 | 7.9E-12 | IPR000719 |
| Pfam | PF01476 | LysM domain | 122 | 150 | 0.041 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 486 | 5.03E-31 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 431 | 509 | 1.1E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 430 | 1.3E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 276 | 350 | 7.8E-12 | - |
| SMART | SM00220 | serkin_6 | 296 | 491 | 1.9E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 296 | 517 | 16.244926 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 411 | 423 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 302 | 324 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_039854917.1 | chitin elicitor receptor kinase 1-like [Panicum virgatum] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Z5RAM1 | Protein kinase domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3007G188100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology