Basic Information
Locus ID:
nbis-gene-17336
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00015.1 | 2730191 | 2733574 | + | nbis-gene-17336 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.19 | 46,764.43 Da | 49.24 | 103.39 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 3.0E-13 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 324 | 342 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 228 | 286 | 1.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 408 | 5.44E-72 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 300 | 1.1E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 189 | 1.4E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 301 | 419 | 7.4E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 201 | 225 | 54.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 321 | 345 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 249 | 273 | 9.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 393 | 424 | 180.0 | IPR003591 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 393 | 406 | 1.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 324 | 337 | 1.4E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 407 | 434 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66830.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025821441.1 | LRR receptor-like serine/threonine-protein kinase [Panicum hallii] | 0 |
| Q9C9N5 | Probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 OS=Arabidopsis thaliana OX=3702 GN=At1g66830 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9T1Y9 | LRRNT_2 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_48557 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31112 |
| Asparagaceae | Asparagus officinalis | 4 | AsparagusV1_03.2897.V1.1, AsparagusV1_04.934.V1.1 ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq05G2321 |
| Casuarinaceae | Casuarina glauca | 3 | Cgl05G1692, Cgl05G2457, Cgl05G2491 |
| Poaceae | Echinochloa crus-galli | 1 | BH01.1045 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_2AG0109500 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0006820.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_066036 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-17336 |