Basic Information
Locus ID:
nbis-gene-17099
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Phosphatidylinositol-4-phosphate 5-Kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00015.1 | 1629040 | 1638110 | + | nbis-gene-17099 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 103,057.70 Da | 55.79 | 72.41 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 387 | 659 | 1.0662E-144 | - |
| Pfam | PF01363 | FYVE zinc finger | 46 | 111 | 6.3E-17 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 409 | 655 | 3.5E-34 | IPR002423 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 453 | 625 | 3.92E-43 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 44 | 115 | 1.25E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 36 | 126 | 8.1E-21 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 452 | 625 | 9.5E-55 | IPR027409 |
| SMART | SM00064 | fyve_4 | 41 | 114 | 1.6E-19 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 49 | 113 | 13.116851 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 125 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 819 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 159 | - | - |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_052165191.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like [Oryza glaberrima] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T2T1 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Eragrostis curvula OX=38414 GN=EJB05_48841 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology