Basic Information
Locus ID:
nbis-gene-17076
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00015.1 | 1489770 | 1496572 | - | nbis-gene-17076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 112,138.23 Da | 51.66 | 81.49 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 266 | 326 | 6.6E-11 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 176 | 215 | 1.7E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 523 | 613 | 4.2E-13 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 176 | 339 | 1.8E-37 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 501 | 608 | 3.79E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 900 | 992 | 8.0E-9 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 495 | 594 | 5.8E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 175 | 356 | 1.2E-51 | IPR032675 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 525 | 547 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 74 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 878 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 737 | 758 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_002445573.1 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 [Sorghum bicolor] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6KNQ8 | Putative LRR receptor-like serine/threonine-protein kinase OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d032142 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Zoysia japonica | 2 | nbis-gene-17076, nbis-gene-50486 |