Basic Information
Locus ID:
nbis-gene-16537
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Ubiquitin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00014.1 | 3608278 | 3613909 | - | nbis-gene-16537 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.36 | 25,949.21 Da | 66.74 | 70.71 | -0.83 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047089005.1 | uncharacterized protein LOC124700985 [Lolium rigidum] | 0 |
| TrEMBL | A0A5J9WAS5 | Myb_DNA-bind_3 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03923 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH01.307, BH01.416, CH01.272 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0256580 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0523990.1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_060920, gene-QYE76_060921, gene-QYE76_060922 |
| Poaceae | Oryza coarctata | 2 | Oco05G026740, Oco06G027730 |
| Poaceae | Oryza sativa | 2 | LOC_Os01g53100.1, LOC_Os03g59370.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G040500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0105695 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G734600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG066530, gene_TRIDC5BG071540 |
| Poaceae | Triticum aestivum | 5 | TraesCS5A02G464200.1, TraesCS5B02G475600.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb061840_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-16537 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g2528 |