Basic Information
Locus ID:
nbis-gene-16247
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00014.1 | 2411382 | 2415798 | - | nbis-gene-16247 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.02 | 34,282.49 Da | 34.28 | 98.22 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 84 | 187 | 4.0E-15 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 205 | 284 | 1.4E-13 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 76 | 288 | 7.26E-43 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 160 | 2.3E-45 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 257 | 285 | 2.1E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 205 | 256 | 1.0E-24 | - |
| SMART | SM00220 | serkin_6 | 84 | 284 | 1.9E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 284 | 13.870415 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 90 | 113 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko03008 (Ribosome biogenesis in eukaryotes)
map03008 (Ribosome biogenesis in eukaryotes)
map04064 (NF-kappa B signaling pathway)
ko04137 (Mitophagy - animal)
map04137 (Mitophagy - animal)
ko04139 (Mitophagy - yeast)
map04139 (Mitophagy - yeast)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04520 (Adherens junction)
map04520 (Adherens junction)
ko04712 (Circadian rhythm - plant)
map04712 (Circadian rhythm - plant)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50000.1 | casein kinase II, alpha chain 2. casein kinase II catalytic subunit alpha | 0 |
| RefSeq | XP_025798430.1 | casein kinase II subunit alpha-2 [Panicum hallii] | 0 |
| Q9AR27 | Casein kinase II subunit alpha-2 OS=Oryza sativa subsp. indica OX=39946 GN=HD6 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WA79 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_04369 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology