Basic Information
Locus ID:
nbis-gene-16206
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00014.1 | 2238347 | 2245440 | - | nbis-gene-16206 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 46,038.70 Da | 48.66 | 104.54 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 253 | 275 | 0.37 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 73 | 2.9E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 135 | 192 | 1.1E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 354 | 423 | 1.14E-7 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 59 | 371 | 1.56E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 425 | 3.1E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 291 | 6.4E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 377 | 4.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 196 | 1.1E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 133 | 156 | 63.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 203 | 227 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 251 | 275 | 4.6 | IPR003591 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 376 | 398 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 251 | 264 | 4.2E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 182 | 195 | 4.2E-5 | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_025797805.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum hallii] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9B7X4 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology